Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIELDLP---AYKDYWNYAVKKGYSGTAIFTKVEPLSVQYGLGIPEHDTEGRVITLEFEEFFMVTVYTPNSQAELKRLDYRMTFEDA---ILEYVKNLDNTKPVVLCGDLNVAHEEIDLKNPKTNRKNAGFSDEERAKFSAFLDA-GFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYFVVSERLKDKLVDAKIHADVLGSDHCPVELELNL |
4B5G Chain:B ((2-253)) | LKIISANVNGIRSAYKKGFYEYIAASGADIVCVQELKAQEADLSADMKNPHGMHGHWHCAEKRGYSGVAVYSKRKPDNVQIGMGIEEFDREGRFVRCDFGRLSVISLYLPSGSSAEERQQVKYRFLDAFYPMLEAMKN--EGRDIVVCGDWNIAHQNIDLKNWKGNQKNSGFLPEEREWIGKVIHKLGWTDMWRTLYPDVP-GYTWWSNRGQAYAKDVGWRIDYQMVTPELAAKAVSAHVYKDEKFSDHAPLVVE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B5G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -108633 for 2031 contacts (-53.5/contact) +
2D Compatibility (PS) -26495 + (NN) -8133 + (LL) 296
1D Compatibility (HY) -20000 + (ID) 5350
Total energy: -168315.0 ( -82.87 by residue)
QMean score : 0.518
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