Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVIFSGIQPSGQLTLGNYIGALKQFGQFQDEYECFYCIVDEHAITVPQDRLKLREQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILLYQTDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPE---VFIPKQGARVMSLQDPTKKMSKSDANLKNAIFLLDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITG-ETIASIEEKYV--GKGYGDFKTDLAELVVSELEPIQERYYAYLKSEE-LDTILDAGAEKAARVANKTLKKMENGVGLGRKRRK |
| 3TZL Chain:A ((4-322)) | --MRVLTGLQPSGDLHIGNYFGAIKQMVDAQEKSQMFMFIANYHAMTSSQDGEKLKQNSLKAAAAFLSLGIDPQKSVFWLQSDVKEVMELYWILSQFTPMGLLERAHSYKDKVAKGLSASHGLFSYPVLMAADILLFDTRIVPVGKDQIQHVEIARDIALKVNNEWGEIFTLPEARVNEE---VAVVVGT-DG-AKMSKSYQ---NTIDIFSSEKTLKKQISSIVTDSTAL--EDP-KDHENCNIFKIAKLFLDESGQKELQIRYEKGGEGYGHFKIYLNELVNAYFKEAREKYNELLEKPSHLKEILDFGATKARKIAQEKMQKIYEKIGL------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3TZL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152026 for 2426 contacts (-62.7/contact) +
2D Compatibility (PS) -34120 + (NN) -14666 + (LL) 1316
1D Compatibility (HY) -22800 + (ID) 6150
Total energy: -228446.0 ( -94.17 by residue)
QMean score : 0.587
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