Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKVRGFELVSQFSNKELLPKRETAHAAGYDLKVAKKTVIEPGEITLVPTGIKAHMQPGEVLYLYDRSSNPRKKGIVLINSVGVIDGDYYNNQVNEGHIFAQMQNITD---------------------------QAVILEEGERIVQAVFAPFL-----LADDDQ-ATGMRTGGFGSTGK
3ZF6 Chain:A ((42-207))
-------LQVKLLSKNARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVIET--GKIAAGY------HGNLGINIKNDHEDDKMQTIFLRNICNEKIFEKERHLYKLGSYRIEKGERIAQLVIVPIWTPELKQVEEFESVSERGEKGFGSCGV
General information:
TITO was launched using:
RESULT:
Template:
3ZF6.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38162 for 835 contacts (-45.7/contact) +
2D Compatibility (PS) -14539 + (NN) -1602 + (LL) 824
1D Compatibility (HY) -6000 + (ID) 1950
Total energy: -61429.0 ( -73.57 by residue)
QMean score : 0.370
(partial model without unconserved sides chains):
PDB file :
Tito_3ZF6.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZF6-query.scw
PDB file :
Tito_Scwrl_3ZF6.pdb
: