Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAKTKYKAKKIKAVFFDIDDTLRVKDTGYMPPSILKVFKALKDKGIVVGIASGRARYGVPKEVQDLNADYCVKLNGAYVKDKDKNIIFHRPIPAEYVEQYKKWADTVGIKYGLAGRHEAVLSDRDDLVNDAIDIVYSDLEVNPDFNKEHDIYQMWTFEDKGDSLHLPEPLDEHLRLIRWHDHSSDVVLKGTSKALGVSKVVEHLGLKPENILVFGDELNDLELFDYAGLAVAMGVSHPEAQKKADFITKKVEEDGILYALEELGLIEKELTFPQVDIENTEGPVAVIKTNHGDMTVKLFPDHAPKTVANFI-------GLAKQG---YYDGIIFHRIIPDFMIQGGDPT-GTGMGGESIYGESFEDEFSEELYNVRGALSMANAGPNTNGSQFFIVQNTKIPYAKKELERGGWPTPIAELYAGQGGTPHLDRRHSVFGQLVNQSSFEVLDEIAAVE-TGSQDKPLEDVVILTIEVKE
4HY7 Chain:A ((18-165))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GRIVMELYKDAVPRTVENFRALCTGEKGVGKSGKPLHYKGSAFHRVIPDFMCQGGDFTRGNGTGGESIYGEKFADEKFVHKHTKPGILSMANAGPNTNGSQFFICT---VPC--------NW----------------LDGKHVVFGEVV-----EGMDVVKNIEKVGSRSGTCSKQVVIADCGQL


General information:
TITO was launched using:
RESULT:

Template: 4HY7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -58287 for 1035 contacts (-56.3/contact) +
2D Compatibility (PS) -14425 + (NN) -7403 + (LL) 20048
1D Compatibility (HY) -10800 + (ID) 3600
Total energy: -74467.0 ( -71.95 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_4HY7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HY7-query.scw
PDB file : Tito_Scwrl_4HY7.pdb: