Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSRKPFIAGNWKMNKNPEEAKAFIEAV-ASKLPSSELVEAGIAAPALTLSTVLEAAKGSELKIAAQNSYFENSGAFTGENSPKVLAEMGTDYVVIGHSERRDYFHETDQDINKKAKAIFANGLTPIICCGESLETYEAGKAVEFVGAQVSAALAGLSEEQVSSLVIAYEPIWAIGTGKSATQDDAQNMCKAVRDVVAADFGQAVADKVRVQYGGSVKPENVAEYMACPDVDGALVGGASLEAESFLALLDFVK |
| 7TIM Chain:B ((1-238)) | -ARTFFVGGNFKLNGSKQSIKEIVERLNTASIP--ENVEVVICPPATYLDYSVSLVKKPQVTVGAQNAYLKASGAFTGENSVDQIKDVGAKWVILGHSERRSYFHEDDKFIADKTKFALGQGVGVILCIGETLEEKKAGKTLDVVERQLNAVLEEVKDW--TNVVVAYEPVWAIGTGLAATPEDAQDIHASIRKFLASKLGDKAASELRILYGGSANGSNAVTFKDKADVDGFLVGGASLKPEFVDIINSRN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 7TIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -75795 for 1986 contacts (-38.2/contact) +
2D Compatibility (PS) -25841 + (NN) -12156 + (LL) 436
1D Compatibility (HY) -18800 + (ID) 4900
Total energy: -137056.0 ( -69.01 by residue)
QMean score : 0.548
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