Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MSQSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHK-TDNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEAHRVPAGGAMAVDREGYSEAVTEEIHKHPLIEVIRDEITDIPGDAITVIATGPLTSDSLAAKIHELNGGDGFYFYDAAAPIVDKNTIDMNKVYLKSRYDKGEAAYLNCPMTKEEFMAFHEALTTAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPRDGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLDQTFATRKNPNLFFAGQMTGVEGYVESAASGLVAGINAARRFNGESEVV-FPQTTAIGALPHYITHTDSKHFQPMNVNFGIIKELEGPRIRDKKERYEAIATRALKDLEKFLNY--- |
| 1C0P Chain:A ((1-363)) | LMMHSQKRVVVLGSGVIGLSSALILARKGYSVHILARDLPEDVSSQTFASPWAGANWTPFMTLTDGPRQAKWEESTFKKWVEL-VPTGHAMWLKGTRRFAQNEDGLLGH-----------------------------WYKDITPNYRPLPSSECPPGAIGVTYDTLSVHAPKYCQYLARELQKL----------GATFERRTVTSLEQAFDGADLVVNATGLGAKSIAGIDDQAAEPIRGQTVLVKSPCKRCTMDSSDPASP--------AYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRL-------------------------------DPTISSDGTIEGI--EVLRHNVGLRPARRGGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFS--------SAGYQQSWGAAEDVAQLVDEAFQRYHG |
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General information:
TITO was launched using:
| RESULT:
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Template: 1C0P.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -20646 for 3093 contacts (-6.7/contact) +
2D Compatibility (PS) -36203 + (NN) -23 + (LL) 5744
1D Compatibility (HY) -3600 + (ID) 2400
Total energy: -57128.0 ( -18.47 by residue)
QMean score : 0.239
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