Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNRLSWEDYFMANAELISKRST---CDRAFVGAVLVKNNRIIATGYNGGVSETDNCNEVGHYMEDGHCIRTVHAEMNALIQCAKEGISTNNTEIYVTHFPC------INCTKALLQAGVKKITYKANYRPH---PFAIELMEAKGVAYVQHDVPEVTLGMEE
2HXV Chain:A ((13-146))
-----MYETFMKRAIELAKKGLGRVNPNPPVGAVVVKDGRIIAEGFHPYF-------------------GGPHAERMAIESARKKGEDLRGATLIVTLEPCDHHGKTPPCTDLIIESGIKTVVIGTRDPNPVSGNGV-EKFRNHGIEVIEGVLEEEVKKLCE
General information:
TITO was launched using:
RESULT:
Template:
2HXV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -74967 for 998 contacts (-75.1/contact) +
2D Compatibility (PS) -13994 + (NN) -11171 + (LL) 1156
1D Compatibility (HY) -4800 + (ID) 1600
Total energy: -105376.0 ( -105.59 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_2HXV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HXV-query.scw
PDB file :
Tito_Scwrl_2HXV.pdb
: