Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSEFDTKSYLEKLDAWWRAANYISAAQMYLKDNPLLRRELVENDLKVHPIGHWGTVPGQNFIYAHLNRA-I-------NKYDLDMFYIEGPGHGGQVMVSNSYLDGS-YTELNPNIEQTEDGFKQLCKIFSFPGG-IASHAAP-ETPGSIHEGGELGYALSHATGAILDN--------------PDVIAATVIGDGEGETGPLMAGWLSNTFINPVNDGAVLPIFYLNGGKIHNPTIFERKTDEELSQFFEGLGWKPIFADVVELSEDHAAAHALFAEKLDQAIQEIKTIQSEARQKPAEEAIQAKFPVLVARIPKGWTGPKAWEGTPIEGGFRAHQVPIPVDAHHMEHVDSLLSWLQSYRPEELFDESGKIVDEIAA-------ISPKGDRRMSMNPITNAGI--VKAM------DTAD-WKKFALDINVPGQIMAQDMIEFGKYAADLVDANPDNFRIFGPDETKSNRLQEVFTRTSRQWLGRRKPDYDEALSPAGRVIDSQLSEHQAEGFLEGYVLT-GRHGFFASYESFLRVVDSMVTQHFKWLRKSKTHTTWRKNYPALNLIAASTVFQQDHNGYTHQDPGILTHLAEKTPEYIREYLPADTNSLLAVMDKAFKAEDKINLIVTSKHPRPQFYSIA-EAEELVAEGYKVIDWASNVSLNQEPDVVFAAAGTEPNLEALAAISILHKAFPELKIRFVNVLDILKLRHPS-QDARGLSDEEFDKVFTTDKPVIFAFHSYEDMIRDIFFSRHNHNLHTHGYRENGDITTPFDMRVMSELDRFHLAQDAALASLGNEAQAFSDEMNQMVAYHKDYIREHGDDIPEVQNWKWENIK |
| 3M49 Chain:A ((38-688)) | -------------------------------------RTLSIDAIEKANSGHPGMPMGAAPMAYTLWTQFMKHNPNNPTWFNRDR-FVLSAGHGSMLLYSLLHLSGYDVTMD---------DL----KNFRQWGSKTPGHPEYGHTAGVDATTGPLGQGIATAVGMAMAERHLAAKYNRDAYNIVDHYTYAICGDGDLMEGV---SAEASSLAAHLQLGRLVVLYDSNDISLDGDLNRSF--SESVEDRYKAYGWQVIRVE--DGN-DIE----AIAKAIEEAKA----------D-------EKRPTLIEVRTTIGFGSPNK------SGKSASHGSPLGVEE--TKLTKEAYAWTAEQD----FHVAEEVYENFRKTVQDVGETAQAEWNTMLGEY-AQAYPELANELQAAMNGLLPEGWEQN-LPTY-ELGSKAATRNSSGAVINAIAESV-PSFFGGSADLAGSNKTYMN-------NEK-DFT----RDDYSGKNIWYGVREFAMGAAMNGIALHGGLKTYGGTFFVFSDYLRPAIRL----AAL--------MQ-LPVTYVFTHDSIAVGEDGPTHEPIEQLAALRAM--PNVSVIRPADGNESVAAWRLALESTNKPTALVLTRQDLPTLEGAKDDTYEKVAKGAYVVSASKK----ETADVILLATGSEV-SLAVEAQKALAVD--GVDASVVSMPSMDRFEAQTAEYKESVLPKAVTKRFAIEM--GATFG---W--HRYVGL----EGDVLGIDTFGASAPGEKIMEEYGFTVENVVRKVKEML------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3M49.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -136292 for 5570 contacts (-24.5/contact) +
2D Compatibility (PS) -64436 + (NN) -26045 + (LL) 13188
1D Compatibility (HY) -2000 + (ID) 4950
Total energy: -220535.0 ( -39.59 by residue)
QMean score : 0.355
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