Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNTPLYKALIQHARRNSHSFHVPGHHNGDVFFDDAKSIFDPLLTIDVTELAGLDDLHHPSGVIKEAQELASQLYGSA--ESFFLVNGTTVGNLAMILSVC----EPGDTILVQRNCHKSVFH----AVDLSGAEPVYLAPDVDSAMHVPTHVPLGTIKEALEAYPDAKGLVLTNPT-YYGHSADLTEIITEAHHYGIPVLVDEAHGA-HFILGEPFPVSALKMGADIVVQSAHKTLPAMTMGSYLHLNSSCRINRDRVAEY--------------------LNRLQSSSPSYPIMASLDIARAYVQHIIE-EQKLSDILQRIETLKQTFDSLTNAEAVNPANPLIITDPLKLTIRSKRGHSGYTLQSILERANIFTELAD------------ENQVLLVLPLGGKRRINAEIIRSIDEEIEKTPPDQTFVSAEWGVQPVTVLPYPKKVLHSFKKEYVSFEEAAGRLNAEDIIPYPPGIPMIMAGERITKESVQKLSRLISMKTHVQGNMKIKEKQLLVYIEEEKS |
| 4LW2 Chain:A ((66-400)) | ------------------------------------------------------------ARYEAAREKVAQLLNAPDDKTIVWTRGTTESINMVAQCYARPRLQPGDEIIVSVAEHHANLVPWLMVAQQTGAKVVKLPLNAQ------RLPDVDLLPELIT--PRSRILALGQMSNVTGGCPDLARAITFAHSAGMVVMVDGAQGAVHFPADV------QQLDIDFYAFSGHKLY-GPTGIGVLYGKSE-LL--EAMSPWLGGGKMVHEVSFDGFTTQSAPWKLEAGTPNVAGVIGLSAALEWLADY-DINQAESWSRSLATLAEDALAKRPGFRSFRCQ------DSSLLAFDFA-GVHHSDMVTLLAEYGIALRAGQHCAQPLLAELGVTGTLRASFAPYNTKSDVDALVNAVDRALE-------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LW2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -172138 for 2403 contacts (-71.6/contact) +
2D Compatibility (PS) -31509 + (NN) -8732 + (LL) 11948
1D Compatibility (HY) -5200 + (ID) 2850
Total energy: -208481.0 ( -86.76 by residue)
QMean score : 0.539
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