Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
4C8I Chain:C ((25-179))
--RIGQGYDVHQLVEGRPLIIGGVTIPYERGLLGHSDADVLLHAITDALFGAAALGDIGRHF-------KGADSRVLLRACAERVKAAGFTIQNVDSTVIAQAPKLAPHIDGMRANIAADLGLPLERVNVKAKTNEKLGYLGRGEGIEAQAAALLVK-
General information:
TITO was launched using:
RESULT:
Template:
4C8I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111723 for 1264 contacts (-88.4/contact) +
2D Compatibility (PS) -15808 + (NN) -7179 + (LL) 24
1D Compatibility (HY) -13600 + (ID) 4550
Total energy: -152836.0 ( -120.91 by residue)
QMean score : 0.608
(partial model without unconserved sides chains):
PDB file :
Tito_4C8I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4C8I-query.scw
PDB file :
Tito_Scwrl_4C8I.pdb
: