Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNQNQLISVEDIVFRYRKDAERRALDGVSLQVYEGEWLAIVGHNGSGKSTLARALNGLILPESGDIEVAGIQLTEESVWEVRKKIGMVFQNPDNQFVGTTVRDDVAFGLENNGVPREEMIERVDWAVKQVNMQDFLD-----------QEPHHLSGGQKQRVAIAGVIAARPDIIILDEATSMLDPIGREEVLETVRHLKEQGMATVISITHDLNEAAKADRIIVMNGGKKYAEGPPEEIFKLNKELVRIGLDLPFSFQLSQLLRENGLALEENHLTQEGLVKELWTLQSKM |
| 3B5J Chain:A ((4-227)) | ------ITFRNIRFRYKPDSPV-ILDNINLSIKQGEVIGIVGRAGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQ--DNVLLNRSIIDNIS--LANPGMS----VEKVIYAAKLAGAHDFISELREGYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALD-YESEHVIMRNMHKICKGR-TVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELL--------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3B5J.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -95510 for 1651 contacts (-57.8/contact) +
2D Compatibility (PS) -22666 + (NN) -6098 + (LL) 5124
1D Compatibility (HY) -18800 + (ID) 4150
Total energy: -142100.0 ( -86.07 by residue)
QMean score : 0.425
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