Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------MTHVKALAIKGIMTIIVLYLVLGLGFGFTFGDTLLMTIVLGVIS-------------YLLGDLYVLPKWNN--MIATLADFGLAFLVIWLMGMPLSMGMTGGEVALAALFGAIVMAIGEYCFHFYMMSKEIGKK-HYLETRTDS
2PR1 Chain:A ((4-155))MTKVERLLINYKTLEEFKKFKEYGIQELSMLEELQDNIIENDSTSPFYGIYFGDKLVARMSLYQVNGKSNPYFDNRQDYLELWKLEVLPGYQNRGYGRALVEFAKSF------KMPIRTNPRMKSAEFWNKMNFKTVK--------YDMARDKGEDPLIWHPDMDR


General information:
TITO was launched using:
RESULT:

Template: 2PR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 354 -65777 -185.81 -576.99
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -185.81
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.109

(partial model without unconserved sides chains):
PDB file : Tito_2PR1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PR1-query.scw
PDB file : Tito_Scwrl_2PR1.pdb: