Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMASIAVCPGSFDPVTYGHLDIIKRGAHIFEQVYVCVLNNSSKKPLFSVEERCELLREVTKDIPNITVETSQGLLIDYAKRKNAKAILRGLRAVSDFEYEMQGTSVNRVLDESIETFFMMTNNQYSFLSSSIVKEVARYNGSVSEFVPPEVELALQQKFRQG
3LCJ Chain:A ((4-156))----AVCPGSFDPVTLGHVDIFERAAAQFDEVVVAILVNPAKTGMFDLDERIAMVKESTTHLPNLRVQVGHGLVVDFVRSCGMTAIVKGLRTGTDFEYELQMAQMNKHI-AGVDTFFVATAPRYSFVSSSLAKEVAMLGGDVSELLPEPVNRRLRDRL---


General information:
TITO was launched using:
RESULT:

Template: 3LCJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 733 -111398 -151.97 -728.09
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.86

3D Compatibility (PKB) : -151.97
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.86
QMean score : 0.406

(partial model without unconserved sides chains):
PDB file : Tito_3LCJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3LCJ-query.scw
PDB file : Tito_Scwrl_3LCJ.pdb: