Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQIKIKYLDETQTRINKMEQGDWIDLRAAEDVAIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTKIKKGDRICQFRIMKKMPAVDLIEVDRLGNGDRGGHGSTGTK
2XCD Chain:B ((3-130))MQIKIKYLDETQTRISKIEQGDWIDLRAAEDVTIKKDEFKLVPLGVAMELPEGYEAHVVPRSSTYKNFGVIQTNSMGVIDESYKGDNDFWFFPAYALRDTEIKKGDRICQFRIMKKMPAVELVEVEHL--------------


General information:
TITO was launched using:
RESULT:

Template: 2XCD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 524 -69333 -132.31 -541.66
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain B : 0.96

3D Compatibility (PKB) : -132.31
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.96
QMean score : 0.454

(partial model without unconserved sides chains):
PDB file : Tito_2XCD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2XCD-query.scw
PDB file : Tito_Scwrl_2XCD.pdb: