Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceKRLVVQRVTEASVTVDEEVVGQ--------IGQGLMVLVGITHDDTEDDAAYLADKVVNLRIFDDSEGKMNLSLVDIGGEILSVSQFTLYGDTKKGRRPNYMNAAKPDKALGLYEKWNDLLREK--GIKVETGTFGAMMDVQLTNSGPVTLIMDSK
3KO3 Chain:D ((2-157))-RVVIQRVKGAILSVRK-----KELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLNYELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDT-


General information:
TITO was launched using:
RESULT:

Template: 3KO3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain D - contact count / total energy / energy per contact / energy per residue : 607 -218 -0.36 -1.56
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain D : 0.83

3D Compatibility (PKB) : -0.36
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.83
QMean score : 0.535

(partial model without unconserved sides chains):
PDB file : Tito_3KO3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KO3-query.scw
PDB file : Tito_Scwrl_3KO3.pdb: