Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSELWYTEKQTKNFGITMKVNKTLHTEQTEFQHLEMVETEEFGNMLFLDGMVMTSEKDEFVYHEMVAHVPLFTHPNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQTDNPWFTPELITNVQRDVKEIFPITKLYTANIPTYPSGLWTFTIGSKKYDPLA-----VEDSRFFDIETKYYTKDIHKAAFVLPKFVSDLIK
4BP3 Chain:B ((17-276))--------------AFSLKIKKILYETKSKYQNVLVFESTTYGKVLVLDGVIQLTEKDEFAYHEMMTHVPMTVSKEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQCESLWIHVGTIKNMIGYAKKLFKKVEYANISIPTYPCGCIGILCCSKTDTGLTKPNKKLESKEFADL--KYYNYENHSAAFKLPAFL-----


General information:
TITO was launched using:
RESULT:

Template: 4BP3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1497 -143465 -95.83 -562.61
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -95.83
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.619

(partial model without unconserved sides chains):
PDB file : Tito_4BP3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4BP3-query.scw
PDB file : Tito_Scwrl_4BP3.pdb: