Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGANHVRNDPIMARLTVITTGGTISTTAGPDGVLRPTHCGATLIAGLD-M----DSDIEVVDLM-ALDSSKLTPADWDRIGAAVQEAFRGGADGVVITHGTDTLEETALWLDLTYA-GSRPVVLTGAMLSADAPGADGPANLRDALAVAADPAARDLGVLVSFGGRVLQPLGLHKVANPDLCGFAG---ESLGFTSGGVRLTRTKTRP-YL--GDLGAAVAPRVDIVAVYPGSDAVAMDACVAAGARAVVLEALGSGNAGA--AVIEGVRRHCRDGSDPVVIAVSTRVAGARVGA-GYGPGHDLVEAGAVMVPRLPPSQARVLLMAALAANS--P-VADVIDRWG |
2HIM Chain:A ((23-349)) | -----------KKSIYVAYTGGTIGMQR-----IPVSGHLQRQLALMPEFHRPEMPDFTIHEYTPLMDSSDMTPEDWQHIAEDIKAHY-DDYDGFVILHGTDTMAYTASALSFMLENLGKPVIVTGSQIPLAELRSDGQINLLNALYVAANYP--INEVTLFFNNRLYRGNRTAKAHADGFDAFASPNLPPLLEAGIHIRRLNTPPAPHGEGELIVHPITPQPIGVVTIYPGISADVVRNFLRQPVKALILRSYGVGNAPQNKAFLQELQEAS-DRGIVVVN--LTQCMSGKVNMG-----NALAHAGVIGGADMTVEATLTKLHYLLSQELDTETIRKAMSQN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HIM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -193907 for 2528 contacts (-76.7/contact) +
2D Compatibility (PS) -32657 + (NN) -17683 + (LL) 20
1D Compatibility (HY) -14000 + (ID) 3650
Total energy: -261877.0 ( -103.59 by residue)
QMean score : 0.444
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