Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTRSGHPVTLDDLPLRADLRGKAPY---GAPQLAVPVRLNTNENPHPPTRALVDDVVRSVREAAIDLHRYPDRDAVALRADLAGYLTAQTGIQLGVENIWAANGSNEILQQLLQAFGGPGRSAIGFV-PSYSMHPIISDGTHTEWIEASRANDFGLDVDVAVAAVVDRKPDVVFIASPNNPSGQSVSLPDLCKLLDVAPG--IAIVDEAYGEFSSQPSAVSLVEEYPSKLVVTRTMSKAFAFAGGRLGYLIATPAVIDAMLLVRLPYHLSSVTQAAARAAL--RHSDDTLSSVAALIAERERVTTSLNDMG--FRVIPSDANFVLFGEFADAPAAWRRYLEAGILIRDV----GIPGYLRATTGLAEENDAFLRASARIATDLVPVTRSPVGAP |
| 1IJI Chain:A ((3-356)) | ------TVTITDLA-RENVRNLTPYQSARRLGGNGDVWLNANEYPTAVEFQLTQQ----------TLNRYPECQPKAVIENYAQYA------GVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTLDNWQLDLQGISDKL--DGVKVVYVCSPNNPTGQLINPQDFRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPH-LAILRTLSKAFALAGLRCGFTLANEEVINLLMKVIAPYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQVFDSETNYILA-RFKASSAVFKSLWDQGIILRDQNKQPSLSGCLRITVGTREESQRVIDALRAEQV------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1IJI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -190394 for 2800 contacts (-68.0/contact) +
2D Compatibility (PS) -37777 + (NN) -25634 + (LL) 2484
1D Compatibility (HY) -24000 + (ID) 5600
Total energy: -280921.0 ( -100.33 by residue)
QMean score : 0.490
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