Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRNRGFGRRELLVAMAMLVSVTGCARHASGARPASTTLPAGADLADRFAELERRYDARLGVYVPATGTTAAIEYRADERFAFCSTFKAPLVAAVLHQ--NPLTHLDKLITYTSDDIRSISPVAQQHVQTGMTIGQLCDAAIRYSDGTAANLLLADLGGPGGGTAAFTGYLRSLGDTVSRLDAEEPELNRDPPGDERDTTTPHAIALVLQQLVLGNALPPDKRALLTDWMARNTTGAKRIRAGFPADWKVIDKTGTGDYGRANDIAVVWSPTGVPYVVAVMSDRAGGGYDAEPREALLAEAATCVAGVLA |
4C6Y Chain:B ((2-259)) | -----------------------------------------AALSEQLAELEKRSGGRLGVAVLDTATGRRIAYRGDERFPMCSTFKALLAAAVLAQVDQGKERLDRRITYSKADLVDYSPVTEKHVGGGMTVAELCEAAITYSDNTAANLLLEALGGP----AALTAFLRSIGDEVTRLDRWEPELNEALPGDPRDTTTPRAMAATLRKLLLGDALSPASREQLVDWLLANKTGDKRLRAGLPADWRVGDKTGTGGHGTTNDIAVIWPPNRAPIVVAVYYTESQA--DAEARDAVIAEVGRLVA---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4C6Y.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127448 for 2305 contacts (-55.3/contact) +
2D Compatibility (PS) -28405 + (NN) -19552 + (LL) 2496
1D Compatibility (HY) -21600 + (ID) 7300
Total energy: -201809.0 ( -87.55 by residue)
QMean score : 0.566
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