Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MIALLAPGQGSQTEGMLSPWLQ-LPGAADQIAAWSKAADLDLARLGTTASTEEITDTAVAQPLIVAATLLAHQELARRCVLAGKDVIVAGHSVGEIAAYAIAGVIAADDAVALAATRGAEMAKACATEPTGMSAVLGGDETEVLSRLEQ----LDLVPANRNAAGQIVAAGRLTALEKLAEDPP-AKARVRALGVAGAFHTEFMAPALDGFAAAAANIATADPTATLLSNRDGKPVTSAAAAMDTLVSQLTQPVRWDLCTATLREHTVTAIVEFPPAGTLSGIAKRELRGVPARAVKSPADLDELANL |
| 3PTW Chain:A ((4-290)) | -LGFLFAGQGAQYVGMGKEFFDNFEESKEVFKRSSEALGIDMEELCFNDPEGLLNKTEFTQPAIITTNMAILTALDKLGV---KSHISCGLSLGEYSALIHSGAINFEDGVKLVKKRGKFMQEAVAEGIGGMVAVLRMTPEQVDEIIEKSSPYGIVEGANYNSPGQIVISGELVALEKAMEFIKEVGGRAIKLPVSAPFHCSMLQPAAEKLEDELNKISINKLNGIVMSNVKGEAYLEDDNIIELLTSQVKKPVLFINDIEKMIESGVDTFIEIGPGKALSGFVKKINKNV----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PTW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -149553 for 2524 contacts (-59.3/contact) +
2D Compatibility (PS) -30148 + (NN) -9407 + (LL) 1380
1D Compatibility (HY) -16400 + (ID) 4000
Total energy: -208128.0 ( -82.46 by residue)
QMean score : 0.500
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