Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLITAIVKPFTLDDVKTSLEDAGVLGMTVSEIQGYGRQKGHTEVYRGAEYSVDFVPKVRIEVVVDDSIVDKVVDSIVRAARTGKIGDGKVWVSPVDTIVRVRTGERGHDAL
4CNZ Chain:B ((1-112))
MKLVMAIIKPFKLDEVREALTSLGIQGLTVSEVKGFGRQKG------------SFLPKVKVEVAVSDDQYEQVVEAIQKAANTGRIGDGKIFVLDIAQAVRIRTGETNTEAL
General information:
TITO was launched using:
RESULT:
Template:
4CNZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -65929 for 679 contacts (-97.1/contact) +
2D Compatibility (PS) -10929 + (NN) -1921 + (LL) 916
1D Compatibility (HY) -10800 + (ID) 2650
Total energy: -91313.0 ( -134.48 by residue)
QMean score : 0.625
(partial model without unconserved sides chains):
PDB file :
Tito_4CNZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4CNZ-query.scw
PDB file :
Tito_Scwrl_4CNZ.pdb
: