Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSSFEGKVAVITGAGSGIGRALALNLSEKRAKLALSDVDTDGL--AKTVRLAQALGAQVKSDRLDVAEREAVLAHADAVVAHFGTVHQVYNNAGIAYNGNVDKSEFKDIERIIDVDFWGVVNGTKAFLPHVIASG-DGHIVNISSLFGLIAVPG-QSAYNAAKFAVRGFTEALRQEMLVARHPVKVTCVHPGGIKTAVARNATVADGEDQQTFAEFFDRRLALHSPEMAAKTIVNGVAKGQARVVVGLEAKAVDVLARIMGSSYQRLVAAGVAKFFPWAK |
4YAI Chain:A ((5-195)) | -----GTTAFITGGASGIGFGIAQRLLANGARLVLADIRQDHLDEARQFFEERQQGRNVHTIRLDVSDRAQMAEAARECEAVMGGPDILINNAGIDPSGPFKDATYQDWDYGLAINLMGPINGIMAFTPGMRARGRGGHIVNTASLAGLTPMPSFMAIYATAKAAVITLTETIRDSM--AEDNIGVTVLMPGPIKSRI---------------------------------------------------------------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4YAI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -80793 for 1561 contacts (-51.8/contact) +
2D Compatibility (PS) -20214 + (NN) -7917 + (LL) 7748
1D Compatibility (HY) -11600 + (ID) 3450
Total energy: -116226.0 ( -74.46 by residue)
QMean score : 0.465
|
|
|