Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGAPTERLVDTNGVRLRVVEAGEPGAPVVILAHGFPELAYSWRHQIPALADAGYHVLAPDQRGYGGSSRPEAIEAYDIHRLTADLVGLLDDVGAERAVWVGHDWGAVVVWNAPLLHADRVAAVAALSVPALP-RAQVPPTQAFRSRFGENFFYILYFQEPGIADAELNGDPARTMRRMIGGLRPPGDQSAAMRMLAPGPDGFIDRLPEPAGLPAWISQEELDHYIGEFTRTGFTGGLNWYRNFDRNWETTADLAGKTISVPSLFIAGTADPVLTFTRTDRAAEVISGPYREVLIDGAGHWLQQERPGEVTAALLEFLTGLELR
5ALJ Chain:A ((249-543))-------------VRLHFVELG--SGPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPNMSPLE--------VFDYQLYFQEPGVAEAELEQNLSRTFKSL---FRASDESVL----VCEAGGLFVNS-PEEPSLSRMVTEEEIQFYVQQFKKSGFRGPLNWYRNMERNWKWACKSLGRKILIPALMVTAEKDFVLVPQMSQHMEDWIPHLKRG-HIEDCGHWTQMDKPTEVNQILIKWL------


General information:
TITO was launched using:
RESULT:

Template: 5ALJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -156452 for 2417 contacts (-64.7/contact) +
2D Compatibility (PS) -29882 + (NN) -11745 + (LL) 2188
1D Compatibility (HY) -28800 + (ID) 5950
Total energy: -230641.0 ( -95.42 by residue)
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_5ALJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5ALJ-query.scw
PDB file : Tito_Scwrl_5ALJ.pdb: