Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTEYEGPKTKFHALMQEQIHNEFTAAQQYVAIAVYFDSEDLPQLAKHFYSQAVEERNHAMMLVQHLLDRDLRVEIPGVDTVRNQFDRPREALALALDQERTVTDQVGRLTAVARDEGDFLGEQFMQWFLQEQIEEVALMATLVRVADRAGA---NLFELENFVAREVDVAPAASGAPHAAGGRL
3QZ3 Chain:A ((9-173))
----FMLSQAMVEHLNEQINLEFFSSNLYLQMSAWCEDKGFDGAAEFLRAHAVEEMQHMQRLFTYVSETGALPILGAIAAPRHDFASLGEVFRETYQHEQKITQQINKLAHVAFTSQDYSTFNFLQWYVAEQHEEEKLFKGILDKLELVGEDGKALFFIDKDLAALAKK---------------
General information:
TITO was launched using:
RESULT:
Template:
3QZ3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59826 for 1250 contacts (-47.9/contact) +
2D Compatibility (PS) -18264 + (NN) -16005 + (LL) 816
1D Compatibility (HY) -8000 + (ID) 1750
Total energy: -103029.0 ( -82.42 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_3QZ3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3QZ3-query.scw
PDB file :
Tito_Scwrl_3QZ3.pdb
: