Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTAPPVHDRAHHPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTSFGGALMTTTDVENYPGFRNGITGPELMDEMREQALRFGAD---LRMEDVESVS------LHGPLKSVVTADGQTHRARAVILAMGAAARYLQVPGEQELLGRGVSSCATCDGFFFRDQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFRASKIMLDRARNNDKIRFLTNHTVVAVDGD-TTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVREAIDVDPDGYVLVQGRTTSTSLPGVFAAGDLVDRTYRQAVTAAGSGCAAAIDAERWLAEHAATGEADSTDALIGAQR |
4YKG Chain:A ((214-515)) | ---------------DVLIVGSGPAGAAAAIYSARKGIRTGLM-GERFGGQILDTVDIENY------ISVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNMNVPGEDQYRTKGVTY-PHCDGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMKADQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLEGAVERNRMGEIIIDAK-CETNVKGVFAAGDCTTVPYKQIIIATGEGAKASLSAFDYL-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -184795 for 2509 contacts (-73.7/contact) +
2D Compatibility (PS) -31704 + (NN) -11480 + (LL) 1944
1D Compatibility (HY) -20800 + (ID) 5150
Total energy: -251985.0 ( -100.43 by residue)
QMean score : 0.484
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