Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MPDRMRGVKSDSPEQESADDALKRIVDGFQHFRREVFPEQQALFKKLANSQRPRAMFITCADSRIVPELITQSSPGDLFVTRNVGNVVPPYGQMNGGVSTAIEYAVLALGVHHIIVCGHSDCGAMRAVLDPQTLERMPTVKAWLRHAEVARTVVADNCDCGASHDTLGVLTEENVVAQLDHLRTHPSVASRLASGQ-LFIHGWVYDIESAQIRAYDAKQGRFLPLDGEHPVPMATPAPRYLSS
2ESF Chain:B ((14-193))
-------------------------------WSKMLVEEDPGFFEKLAQAQKPRFLWIGCSDSRVPAERLTGLEPGELFVHRNVANLV-IHTDLN--CLSVVQYAVDVLEVEHIIICGHYGCGGVQAAVENPEL---GLINNWLLHIRDIWFKHSSLLGEMPQERRLDTLCELNVMEQVYNLGHSTIMQSAWKRGQKVTIHGWAYGIHDGLLRDLDVTATNRETLEQRYRHGISNLKLK----
General information:
TITO was launched using:
RESULT:
Template:
2ESF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116384 for 1339 contacts (-86.9/contact) +
2D Compatibility (PS) -19497 + (NN) -11403 + (LL) 1472
1D Compatibility (HY) -16000 + (ID) 3100
Total energy: -164912.0 ( -123.16 by residue)
QMean score : 0.452
(partial model without unconserved sides chains):
PDB file :
Tito_2ESF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ESF-query.scw
PDB file :
Tito_Scwrl_2ESF.pdb
: