Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQASSTDTPFVIAGRTYGSRLLVGTGKYKDLDETRRAIEASGAEIVTVAVRRTNIGQNPDEPNLLDVIPPDRYTILPNTAGCYDA---VEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPL-AGLIGSGLGI--CNPYNLRI----ILE-EAKVPVLVDAGVGTASDAAIAMELGCEAVLMNTAIAHAKDPVMMAEAMKHAIVAGRLAYLAGRMPRKLYASASSPLDGLID |
| 1W0M Chain:A ((56-225)) | ------------------------------------------------------------DIPVYAQGADV-------EAGGAHTAHVSLENIKEAGGSGVI------L---NHSEAPLKLNDLARLVAKAKS---LGLDVVV-CAPDPRTSLAAAALGPHAVAVEPPELIGTGRAVSRYKPEAIVETVGLVSRHFPEVSVITGAGIESGDDVAAALRLGTRGVLLASAAVKAKDPYAKIVELAKPLSELR------------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1W0M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -116618 for 1219 contacts (-95.7/contact) +
2D Compatibility (PS) -17278 + (NN) -7262 + (LL) 6472
1D Compatibility (HY) -1200 + (ID) 1850
Total energy: -137736.0 ( -112.99 by residue)
QMean score : 0.386
|
|
|