Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACHFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
4B0I Chain:B ((2-171))
-TKQHAFTREDLLRCSRGELFGPGNAQLPAPNMLMIDRIVHISDVGGKYGKGELVAELDINPDLWFFACNFEGDPVMPGCLGLDAMWQLVGFYLGWQGNPGRGRALGSGEVKFFGQVLPTAKKVTYNIHIKRTINRSLVLAIADGTVSVDGREIYSAEGLRVGLFTSTDSF
General information:
TITO was launched using:
RESULT:
Template:
4B0I.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -126738 for 1338 contacts (-94.7/contact) +
2D Compatibility (PS) -17873 + (NN) -8133 + (LL) 208
1D Compatibility (HY) -25200 + (ID) 8450
Total energy: -186186.0 ( -139.15 by residue)
QMean score : 0.567
(partial model without unconserved sides chains):
PDB file :
Tito_4B0I.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4B0I-query.scw
PDB file :
Tito_Scwrl_4B0I.pdb
: