Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTAQLIDGKAIAANLRQQIAQRVTERRQQ-GLRVPGLAVILVGTDPASQVYVAHKRKDCEEVGFLSQAYDLPAETSQDDLLALIDRLNDDPAIDGILVQLPLPA--HLDASLLLERIHPDKDVDGFHPYNIGRLAQRM--PLLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLADHVSRADLVVVAAGKPGLVKGEWIKEGAIVIDVGINRQADGRLVGDVEYEVAAQRASWITPVPGGVGPMTRACLLENTLHAAEHLHD |
| 1A4I Chain:A ((2-295)) | APAEILNGKEISAQIRARLKNQVTQLKEQVPGFTPRLAILQVGNRDDSNLYINVKLKAAEEIGIKATHIKLPRTTTESEVMKYITSLNEDSTVHGFLVQLPLDSENSINTEEVINAIAPEKDVDGLTSINAGRLARGDLNDCFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEEVNKGDILVVATGQPEMVKGEWIKPGAIVIDCGINY----KVVGDVAYDEAKERASFITPVPGGVGPMTVAMLMQSTVESAKRFLE |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A4I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -198559 for 2453 contacts (-80.9/contact) +
2D Compatibility (PS) -30701 + (NN) -13485 + (LL) 16
1D Compatibility (HY) -26800 + (ID) 6200
Total energy: -275729.0 ( -112.40 by residue)
QMean score : 0.593
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