Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNQEVRFSRLEPEQRKALLIEATLACLKRHGFQGASVRKICAEAGVSVGLINHHYDGKDALVAEAYLAVTGRVMRLLRGAIDT-APGGARPRLSAFFEASFSAELLDPQLLDAWLAFWGAVGSIEAIGRVHDHSYGEYRALLVGVLRQLAEEGGWA-DFDAELAAISLSALLDGLWLESGLNPA-TFTPRQGVQICEAWVDGLEAGAHRRFRRAMEAC
3Q0W Chain:A ((42-227))
-----------GDDRELAILATAENLLEDRPLADISVDDLAKGAGISRPTFYFYFPSKEAVLLTLLDRVVNQADMALQTLAENPADTDRENMWRTGINVFFETFGSHKAVTRAGQA---ARATSVEVAELWSTFMQKWIAYTAAVIDAERDRGAAPRTLPAHELATALNLMNERTLFASFAGEQPSVPEARVLDTLVHIW------------------
General information:
TITO was launched using:
RESULT:
Template:
3Q0W.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111294 for 1303 contacts (-85.4/contact) +
2D Compatibility (PS) -20515 + (NN) -17144 + (LL) 2624
1D Compatibility (HY) -3200 + (ID) 1150
Total energy: -150679.0 ( -115.64 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_3Q0W.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3Q0W-query.scw
PDB file :
Tito_Scwrl_3Q0W.pdb
: