Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | LAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVGEVLKD--MQIDAVYTSTSKRTQDTAAYILGDRE---IEIQPLEELKEMGFGTWEGIRVTEIDEKHPEERAKILH-------------SPET---------YK-AEVNGGETYYELAERLLEGVEKIIAD--NPNGNILVVSHGMSLTLLLYL-LQGGTIEDHRKEAPRILNTSISIVEYQN-GEFSLKKINEIGHLDLK |
1QHF Chain:A ((1-234)) | -----PKLVLVRHGQSEWNEKNLFTGWVDVKLSAKGQQEAARAGELLKEKKVYPDVLYTSKLSRAIQTANIALEKADRLWIPVNRSWRLNERHYGDLQGKDKAETLKKFGEEKFNTYRRSFDVPPPPIDASSPFSQKGDERYKYVDPNVLPETESLALVIDRLLPYWQDVIAKDLLSGKTVMIAAHGNSLRGLVKHLEGISDADIAK--L-NIPTGIPLVFELDENLKPSKPSYYLDPEAAA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QHF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -48285 for 1625 contacts (-29.7/contact) +
2D Compatibility (PS) -22135 + (NN) -7513 + (LL) 520
1D Compatibility (HY) -5600 + (ID) 2550
Total energy: -85563.0 ( -52.65 by residue)
QMean score : 0.472
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