Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGNLNWAILGPGSIAHEFAEGMRGM-NREIYAVGARSLEKGQAFASQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSKELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDPKNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKKF------ETGVDEQSGILLKNNEEELAVVSLSFRA--KMPKRGVIACEEGFITVDEYPRASRATVTHTATGKV-E-EI--EVGETSKALEYEITAMEESVATG-EN-MTYQLTNDVIAIMSDVRTQWGIKFPFEK |
| 3EUW Chain:A ((3-331)) | -LTLRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAVASPDEVFARDDIDGIVIGSPTSTHVDLITRAVERGIPALCEKPIDLDIEMVRACKEKIGDGASKVMLGFNRRFDPSFAAINARVANQEIGNLEQLVIISRDPAPA-PKDYI---AGSGGIFRDMTIHDLDMARFFVPN-IVEVTATGANVFSQEIAEFNDYDQVIVTLRGSKGELINIVNSRHCSYGYDQRLEAFGSKGMLAADNI-RPTTVRKHNAESTEQADPIFNFFLERYDAAYKAELATFAQGIRDGQGFSPNFEDGVIALELANACLESAQTGRTVT- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3EUW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175732 for 2609 contacts (-67.4/contact) +
2D Compatibility (PS) -33326 + (NN) -4091 + (LL) 432
1D Compatibility (HY) -8400 + (ID) 2850
Total energy: -223967.0 ( -85.84 by residue)
QMean score : 0.511
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