Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKRHFETTRRIVIKVGTSSLVQTSG-KINLSKIDHLAFVISSLMNRGMEVILVSSGAMG-FGLD--ILKMDKRPQEISQQQAVSSVGQVAMMSL-YSQIFSHYQTHVSQI-LLTRDVVVFPESLQNVTNSFESLLSMGILPIVNENDAVSVDEMDHKTKFGDNDRLSAVVAKITKADLLIML-SDIDGLFDKNPNIYDDAVLRSHVSEITDDIIKSAGGAGSKFGTGGMLSKIKSAQMVFDNNGQMILMNGANPRDILKVLDGHNIGTYFAQGK |
| 1Z9D Chain:A ((4-241)) | ----EPKYQRILIKLSGEALAGEKGVGIDIPTVQAIAKEIAEVHVSGVQIALVIGGGNLWRGEPAADAGMDRV--QADYTGMLGT----VMNALVMADSLQHYGVDTRVQTAIPMQNVAE--PYIRG-RAL-RHLEKNRIVVFGA--GI------GS-PYFSTDTTAALRAAEIEADAILMAKNGVDGVYNADPKKDANAVKFDELTHGE--VIK----------RGLKIMDATASTLSMDNDIDLVVFNMNEAGNIQRVVFGEHIGTTVSNK- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1Z9D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -154834 for 1878 contacts (-82.4/contact) +
2D Compatibility (PS) -24889 + (NN) -7617 + (LL) 720
1D Compatibility (HY) -6800 + (ID) 2250
Total energy: -195670.0 ( -104.19 by residue)
QMean score : 0.450
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