Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGLLVDGKWVDQWYDTASTGGKFVRTVTQFRHWVTKDGSAGPSGDAGFKAESGRYHLYVSLACPWASRVLIMRKLKNLESHI-SISIVNPLMLENGWTFQEYKGVIPDMINQSQYLYQIYQASQSDYTGRVTVPVLWDKKCHTIVNNESSEIMRMLNTAFNHITGNTDDYYPD--SLQGQIDEMNNFIYPKINNGVYKAGFATS-QNVYQKEVETLFTALDQLEKHLSDNHYLVGEQFTEADIRLFTTLVRFDTVYYGHFKCNLKALHDYPHLWHYTKRIYNLPGIAETVNFDHIKKHYYGSHKTINPTGIIPAGPNLDWTI |
| 3GTU Chain:B ((3-208)) | ---------------------------------------------------ESSMVLGYWDIRGLAHAIRLLLEFTDTSYEEKRYTCGEA----PDYD-------------RSQWLDVKFKLDLDF--P--NLPYLLDG--K-NKITQSNAILRYIARKHN--------MCGETEEEKIRVDIIENQVMDFRT-QLIRLCYSSDHEKLKPQYLEELPGQLKQFSMFLGKFSWFAGEKLTFVDFLTYDILDQNRIF-------DPKCLDEFPNLKAFMCRFEALEKIAAYLQSDQFCKMPINNKMAQWGNKPVC--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GTU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109921 for 1446 contacts (-76.0/contact) +
2D Compatibility (PS) -21236 + (NN) -5073 + (LL) 4868
1D Compatibility (HY) -11200 + (ID) 1700
Total energy: -144262.0 ( -99.77 by residue)
QMean score : 0.417
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