Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---MTLAEYSEAEFQKALR----------RNIRALTRGKTISSTPKAVLLGGQSGAGKTTIHRIKQKEF-----QGNIIIIDGDSFRSQHPNYLALQEEYG-------------KYSVDYTKDFAGKMVEHLIGGLSKQSYHLLIEGTLR-------------------TTEVPRKTAQLLKSRGYQV---SLALIATKPELSYLSTLIRYEELYA----IDPNQARATPKEYHDGIVEHLVDNLRELENDKLFNRIQIYQRDRHC-------VYDSETDKGIAAEVLQECLFGKWSKVEEEMLR--VGQERLRELSMRTPK---- |
| 1IQP Chain:A ((2-327)) | SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGINVIREKVKEFARTKPIGGASFKIIFLDEADALTQDAQQALRRTMEMFSSNVRFILSCNYSSKIIEPIQSRCAIFRFRPLRDEDIAKRLRYIAENEGLELTEEGLQAILYIAEGDMRRAINILQAAAALDKKITDENVFMVASRARPEDIREMMLLALKGNFLKAREKLREILLKQGLSGEDVLVQMHKEVFNLPIEEPKKVLLADKIGEYNFRLVEGANEIIQLEALLAQFTLIGKK |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1IQP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -10866 for 1725 contacts (-6.3/contact) +
2D Compatibility (PS) -27616 + (NN) -13811 + (LL) 0
1D Compatibility (HY) -1200 + (ID) 1550
Total energy: -55043.0 ( -31.91 by residue)
QMean score : 0.361
|
|
|