Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MS--SPPKIRRYIPADRDATLAIWLEASRVGHGFLGEAELQKQKALVRDHYLDASETWLALDGDTPLGFIGLL-----------DAFIGGLFVAPTAHGRGIGRQLVEHAATLK----GALEVEVYAANREALGFYARCGFVESGRRPRDDEGRALEIVQLRREH
1WWZ Chain:A ((1-157))
MDEIKIEKLKKLDKKALNELIDVYMSGYEGLEEYGGEGRDYARNYIKWCWKKASDGFFVAKVGDKIVGFIVCDKDWFSKYEGRIVGAIHEFVVDKKFQGKGIGRKLLITCLDFLGKYNDTIELWVGEKNYGAMNLYEKFGFKKVGKSGI-------WVRMIKRQ-
General information:
TITO was launched using:
RESULT:
Template:
1WWZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -53018 for 1033 contacts (-51.3/contact) +
2D Compatibility (PS) -15667 + (NN) -9375 + (LL) 244
1D Compatibility (HY) -8000 + (ID) 1350
Total energy: -87166.0 ( -84.38 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1WWZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WWZ-query.scw
PDB file :
Tito_Scwrl_1WWZ.pdb
: