Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKLLLLAALLTAGVTAHSISTRAVWQFRNMIKCTIPGSDPLREYNNYGCYCGLGGSGTPVDDLDRCCQTHDHCYNQAKKLESCKFLIDNPYTNTYSYKCSGNVITCSDKNNDCESFICNCDRQAAICFSKVPYNKEYKDLDTKKHC
2BCH Chain:A ((1-119))
----------------------ALWQFNGMIKCKIPSSEPLLDFNNYGCYCGLGGSGTPVDDLDRCCQTHDNCYMQAMKLDSCKVLVDNPYTNNYSYSCSNNEITCSSENNACEAFICNCDRNAAICFSKVPYNKEHKNLD-----
General information:
TITO was launched using:
RESULT:
Template:
2BCH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52042 for 902 contacts (-57.7/contact) +
2D Compatibility (PS) -12944 + (NN) -9653 + (LL) 2652
1D Compatibility (HY) -16000 + (ID) 4650
Total energy: -92637.0 ( -102.70 by residue)
QMean score : 0.400
(partial model without unconserved sides chains):
PDB file :
Tito_2BCH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2BCH-query.scw
PDB file :
Tito_Scwrl_2BCH.pdb
: