Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MALKSLVLLSLLVLVLLLVRVQPSLGKETAAAKFERQHMDSSTSAASSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
2XOI Chain:B ((1-124))
--------------------------KETAAAKFERQHMDSSTS--SSSNYCNQMMKSRNLTKDRCKPVNTFVHESLADVQAVCSQKNVACKNGQTNCYQSYSTMSITDCRETGSSKYPNCAYKTTQANKHIIVACEGNPYVPVHFDASV
General information:
TITO was launched using:
RESULT:
Template:
2XOI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40827 for 867 contacts (-47.1/contact) +
2D Compatibility (PS) -13502 + (NN) -7476 + (LL) 3424
1D Compatibility (HY) -14000 + (ID) 6100
Total energy: -78481.0 ( -90.52 by residue)
QMean score : 0.415
(partial model without unconserved sides chains):
PDB file :
Tito_2XOI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XOI-query.scw
PDB file :
Tito_Scwrl_2XOI.pdb
: