Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDSKYQCVKLNDGHFMPVLGFGTYAPAEVPKSKALEATKLAIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVKREDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPG--------EEVIPKDENGKILFD-TVDLCATWEAVEKC---KDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVLVAYSALGSHREEPWVDPNSPVLLEDPVLCALAKKHKRTPALIALRYQLQRGVVVLAKSYNEQRIRQNVQVFEFQLTSEEMKAIDGL-NRN-VRYLTLDIFAGPPNYPFSDEY |
| 4IJR Chain:A ((22-334)) | ----EIYFSLNNGVRIPALGLGTANPH-EKLAETKQAVKAAIKAGYRHIDTAWAYETEPFVGEAIKELLEDGSIKREDLFITTKVWPVLW--DEVDRSLNESLKALGLEYVDLLLQHWPLCFEKIKDPKGISGLVKTPVDDSGKTMYAADGDYLETYKQLEKIYLDPNDHRVRAIGVSNFSIEYLERLIKECR--VKPTVNQVETHPHLPQMELRKFCFMHDILLTAYSPLGSHG--------AP-NLKIPLVKKLAEKYNVTGNDLLISYHIRQGTIVIPRSLNPVRISSSIEFA--SLTKDELQELNDFGEKYPVRFIDEPFAAILPEFTG---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -192169 for 2546 contacts (-75.5/contact) +
2D Compatibility (PS) -32841 + (NN) -22236 + (LL) 1112
1D Compatibility (HY) -20000 + (ID) 5500
Total energy: -271634.0 ( -106.69 by residue)
QMean score : 0.639
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