Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAAPSPSGGGGSGGGSGSGTPGPVGSPAPGHPAVSSMQGKRKALKLNFANPPFKSTARFTLNPNPTGVQNPHIERLRTHSIESSGKLKISPEQHWDFTAEDLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICME----------LMSTSFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDS-IAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFILMYEERAVEVACYVCKILDQMPATPSSPMYVD |
| 4FZF Chain:B ((8-277)) | ---------------------------------------------------------------------------------------------------ELFTKLERIGKG--GEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEI-TVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQ--IATMLKEIL-------------KGLDYLHSEKKI-HRDIKAANVLLSEQGDVKLAAFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSA----YDSKADIWSLGITAIELAKGEPPNSDMHPM-RVLFLIPKNNPPTLVG----DFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKK----TSYLTELIDRFKRWKAE----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4FZF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -136406 for 2011 contacts (-67.8/contact) +
2D Compatibility (PS) -26633 + (NN) -11222 + (LL) 3656
1D Compatibility (HY) -20000 + (ID) 4950
Total energy: -195555.0 ( -97.24 by residue)
QMean score : 0.312
|
|
|