Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNVSERIYDSKNSLKFLDDEIYQSIERELQRQRSQLQLIASENFASKAVMEAQGSFLTNKYAEGYIGKRYYCGCEYVDEVENLAIERLCKLFNVRFANVQPHSGSQANQAVFASLLTPGDTILGLSISCGGHLTHGAAPNLSGKWFKSIQYAIDRGTCLLDMDEVERLALEHKPKLIIAGASAYPRRMDFKRFREIADKVSAYLLADIAHYAGLIAAGEYPSPAKYAHIITSTTHKTLRGPRGGVVITNDEALHKKVQSAVFPGLQGGPLMHVIAAKAVAFKEALAPEFKAYIKRVVENAKVLAQALQKH-GLSVITGGTDSHIVLVDLRPQKLTGKGAVDSLERAGITCNKNSVPFDMEKPTITSGLRFGTAAETTRGLKAENFKEIADLINEVIQGLINGNNSDVERIVKNKVKKICDDFPIY |
| 4WXG Chain:A ((19-428)) | -------------DYKAFDPELWNAIDAEAERQQNNIELIASENVVSKAVMAAQGTLLTNKYAEGYPGKRYYGGTAVIDVVETLAIERAKKLFGAKFANVQPHSGSQANAAVYMSLIQPGDTVMGMDLSAGGHLTHGAPVSFSGKTYNFVSYNVDKESELLDYDAILAQAKEVRPKLIVAGASAYSRIIDFAKFREIADAVGAYLMVDMAHIAGLVASGHHPSPVPYAHVTTTTTHKTLRGPRGGLILTDDEDIAKKLNSAVFPGLQGGPLEHVIAAKAVALKEALDPAFKEYGENVIKNAAAMADVFNQHPDFRVISGGTNNHLFLVDVTKVVENGKVAQNVLEEVNITLNKNSIPYEQLSPFKTSGIRVGSPAITSRGMGEAESRQIAEWM---VEALENHDKPEVLERIRGDVKVLTDAFPLY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WXG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211137 for 3742 contacts (-56.4/contact) +
2D Compatibility (PS) -45025 + (NN) -25563 + (LL) 940
1D Compatibility (HY) -34000 + (ID) 11000
Total energy: -325785.0 ( -87.06 by residue)
QMean score : 0.550
|
|
|