Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSNNIIESFGRDQLENFINYKNKIGIGALDIALNSGNKKAIEVLKSYGADIENR-VDGESRLLRALKEGNIEKMELLLS
1OY3 Chain:D ((240-294))
------------------------CGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA
General information:
TITO was launched using:
RESULT:
Template:
1OY3.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6029 for 375 contacts (-16.1/contact) +
2D Compatibility (PS) -5924 + (NN) -2733 + (LL) 1176
1D Compatibility (HY) -2000 + (ID) 800
Total energy: -16310.0 ( -43.49 by residue)
QMean score : 0.562
(partial model without unconserved sides chains):
PDB file :
Tito_1OY3.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OY3-query.scw
PDB file :
Tito_Scwrl_1OY3.pdb
: