Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MHVHKNVVEFFLNQELNISDPDKDGWTSLHYAVQRGCLEVVKFLARKGKSINVENAYGSKPVHRAASGGHKNVVEFFLIKE
3TWR Chain:A ((56-128))
-----SVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHG
General information:
TITO was launched using:
RESULT:
Template:
3TWR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37508 for 524 contacts (-71.6/contact) +
2D Compatibility (PS) -7974 + (NN) -5305 + (LL) 552
1D Compatibility (HY) -7200 + (ID) 1150
Total energy: -58585.0 ( -111.80 by residue)
QMean score : 0.561
(partial model without unconserved sides chains):
PDB file :
Tito_3TWR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3TWR-query.scw
PDB file :
Tito_Scwrl_3TWR.pdb
: