Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVQVVEAFGKPHVNVGTIGHVDHGKTTLTAAITKH----YGNFVAYDQIDKAPEERKRGITIATAHVEYQTEKRHYAHVDCPGHADYVKNMIVGAAQMDAAILVVSGVDGPMPQTREHILLAKQVGVGYIVVYINKAD-VSDPDMIGLVEMEVRELLSKYGFPGDEVPVVIGSALKALE-DDDGEYGKKSIDKLMERLDDYVEVPPRSVDLPFLLPIEDVFSISGRGTVVTGRIEKGEIKIGDEIEIIGLKATQKTTCTGVEMFKKLLEKGSAGLNVGILLRGTKREEVERGQVLAKPGTITPHRKFKAEVYILKKEEGGRHTPFFANYQPQFYLRTTDVTGSIKLLEGKEMVMPGDNVSIEVELQVPIAMDKGLRFAIREGGRTVGSGVVSEILE |
| 4IW3 Chain:K ((47-433)) | ----------PHVNVGTIGHVDHGKTTLTAALTRVCSEVFG------KIDSAPEEKA-GITINTAHVEYNSTIRHYAHVDCPGHADYVKNMITGAAQMDGAILVCSAADGPMPQTREHILLSRQVGVPYIVVFLNKADLV--AELLELVEMEVRDLLSTYDFPGDDTPIIIGSARMALEGKDDNEMGTTAVKKLVETLDSYIPEPVRAIDQPFLMPIEDVFSISGRGTVVTGRIERGIVRVQDPLEIVGLRDTTTTTCTGVEMFRKLLDEGRAGENCGVLLRGTKRDDVERGQVLVKPGSVKPHTKFTAEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGNCELPEGVEMVMPGDNIQMTVTLIKTIAMEDGLRFAIREGGRTVGAGVVAKIIE |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4IW3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -211458 for 3046 contacts (-69.4/contact) +
2D Compatibility (PS) -40820 + (NN) -16317 + (LL) 1576
1D Compatibility (HY) -44400 + (ID) 13100
Total energy: -324519.0 ( -106.54 by residue)
QMean score : 0.590
|
|
|