Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKIIYCITKA----DNGGAQTHLIQLANHF-CVHHDVYVIVGNHGPMIEQLDARVNVIILEHLVGP-----------------------------------IDFKQDILAVKVLAQLFSKI--------KPDVIHLHSSKAGTVGRIAKFISKSKDTRVVFTAHGWAFTEGVKPAKKFL------------------YLVIEKLMSCITDSIICVSDFDKQ----------LALKYRFNRLKLTTIHNGI-------ADVPAVKQTLKSQSHNNIGEVVGMLPNKQDLQINAPTKHQFVMIARFAYPKLPQNLIAAIEILKLHNSNHAHFTFIGDGPTLNDCQQQVVQAGLENDVTFL--GNVINASHLLSQYDTFILISKHEGLPISIIEAMATGLPVIASHVGGISELVAD-----------NGICMMNNQPETIAKVLEKYLIDSDYIKMSNQSRKRYLEC-FTEEKMIKEVEDVYNGKSTQ |
| 1RZU Chain:A ((1-477)) | MNVLSVSSEIYPLIKTGGLADVVGALPIALEAHGVRTRTLIPGYPAVKAAVTDPVKCFEFTDLLGEKADLLEVQHERLDLLILDAPAYYERSGGPYLGQTGKDYPDNWKRFAALSLAAARIGAGVLPGWRPDMVHAHDWQAAMTPVYMRY-AETPEIPSLLTIHNIAFQ-GQFGANIFSKLALPAHAFGMEGIEYYNDVSFLKGGLQTATALSTVSPSYAEEILTAEFGMGLEGVIGSRAHVLHGIVNGIDADVWNPATDHLIHDNYSAANLKNRALNKKAVAEHFRID--DDGSPLFCVISRLTWQKGIDLMAEAVDEIVSLG---GRLVVLGAGDVALEGALLAAASRHHGRVGVAIGYNEPLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGCIPVVARTGGLADTVIDANHAALASKAATGVQFSPVTLDGLKQAIRRTVRYYHDPKLWTQMQKLGMKSDVSWEKSAGLYAALYSQLIS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1RZU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -214290 for 3227 contacts (-66.4/contact) +
2D Compatibility (PS) -41170 + (NN) -16842 + (LL) 488
1D Compatibility (HY) -6400 + (ID) 2950
Total energy: -281164.0 ( -87.13 by residue)
QMean score : 0.404
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