Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIVITGAKGFVGKNLKADLTSTTDHHIFEVHRQTKE-------------------EELESALLKADFIVHLAGVNRP-----EHDKEFSLGNVSYLDHVLDILTRNTKKPAILLSSSIQATQ----------------------DNPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPNY--NSVIATFCYKIARN-EEIQV-NDRNVELTLNYVDDIVAEIKRAIEGTPTIENGVPTVPNVFKVTLGEIVDLLYKFKQSRLDRTLPKLDNLFEKDLYSTYLSYLPSTDFSYPLLMNVDDRGSFTEFIKTPDRGQVSVNISKPGITKGNHWHHTKNEKFLVVSGKGVIRFRHVNDDEIIEYYVSGDKLEVVDIPVGYTHNIENLGDTDMVTIMWVNEMFDPNQPDTYFLEV |
| 2C5A Chain:A ((30-294)) | LKISITGAGGFIASHIARRLKHEG-HYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMIEAARING-IKRFFYASSACIYPEFKQLETTNVSLKESDAWPAEPQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGREKAPAAFCRKAQTSTDRFEMWGDGLQTRSFTFIDECVEGVLRLTKSDF---REPVNIGSDEMVSMNEMAEMVLSFEEKKL----------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2C5A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122306 for 1701 contacts (-71.9/contact) +
2D Compatibility (PS) -23681 + (NN) -15798 + (LL) 8104
1D Compatibility (HY) -10400 + (ID) 2050
Total energy: -166131.0 ( -97.67 by residue)
QMean score : 0.525
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