Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTNDIYFMTLAIEEAKKAAQLGEVPIGAIITK--DDEVIARAHNLRETLQQPTAHAEHIAIERAAKVLGSWRLEGCTLYVTLEPCVMCAGTIVMSRIPRVVYGADDPKGGCSGSLMNLLQQSNFNHRAIVDKGVLKEACSTLLTTFFKNLRANKKSTN
1P6O Chain:A ((12-159))
-KWDQKGMDIAYEEAALGYKEGGVPIGGCLINNKDGSVLGRGHNMRFQKGSATLHGEISTLENCGRLE-GKVYKDTTLYTTLSPCDMCTGAIIMYGIPRCVVGENVNFKSK---GEKYLQ----TRGHEVV-VVDDERCKKIMKQFIDERPQDWFEDI
General information:
TITO was launched using:
RESULT:
Template:
1P6O.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -88956 for 1310 contacts (-67.9/contact) +
2D Compatibility (PS) -16075 + (NN) -9604 + (LL) 16
1D Compatibility (HY) -7200 + (ID) 2250
Total energy: -124069.0 ( -94.71 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_1P6O.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1P6O-query.scw
PDB file :
Tito_Scwrl_1P6O.pdb
: