Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEWSQIFHDITTKHDFKAMHDFLEKEYSTAIVYPDRENIYQAFDLTPFENIKVVILGQDPYHGPNQAHGLAFSVQPNAKFPPSLRNMYKELADDIGCVRQTPH--LQDWAREGVLLLNTVLTVRQGEANSHRDIGWETFTDEIIKAVSDYKEHVVFILWGKPAQQKIKLIDTSKHCIIKSVHPSPLSAYRGFFGSKPYSKANAYLESVGKSPINWCESEA
2C53 Chain:A ((53-242))
-----------------------NRRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQNPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIR-PDPRVHCVLKFSNPSPLSKV-PFGTCQHFLVANRYLETRSISPIDW-----
General information:
TITO was launched using:
RESULT:
Template:
2C53.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -94052 for 1457 contacts (-64.6/contact) +
2D Compatibility (PS) -20158 + (NN) -6952 + (LL) 2684
1D Compatibility (HY) -16000 + (ID) 4100
Total energy: -138578.0 ( -95.11 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_2C53.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2C53-query.scw
PDB file :
Tito_Scwrl_2C53.pdb
: