Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSNKSLAMIVVAIIIVGVLAFQFMNHTGPFKKGTNHETVQDLNGKDKVHVQRVVDGDTFIANQNGKEIKVRLIGVDTPETVKPNTPVQPFGKEASNYSKKTLTN-QDVYLEYDK-EKQDRYGRTLAYVWISKDRMYNKELVEKGLAREKY-FSPNGKYRNVFIEAQNKAKQQKLNIWSK |
| 3R3O Chain:A ((9-135)) | ---------------------------------------------KEPATLIKAIDGDTVKLMYKGQPMTFRLLLVDTPEF------NEKYGPEASAFAKKMVENAKKIEVEFDKGQRTDKYGRGLAYIY-ADGKMVNEALVRQGLAKVAYVYKGNNTHEQLLRKAEAQAKKEKLNIWS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3R3O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -309 for 976 contacts (-0.3/contact) +
2D Compatibility (PS) -13397 + (NN) -5186 + (LL) 3536
1D Compatibility (HY) -9600 + (ID) 2400
Total energy: -27356.0 ( -28.03 by residue)
QMean score : 0.494
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