Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKFAVIGNPISHSLSPVMHRANFNSLGLDDTYEALNIPIEDFHLIKEIISKKELDGFNITIPHKERIIPYLDYVDEQAINAGAVNTVL-IKDGKWIGYNTDGIGYVKGLHSVYPDLENAYILILGAGGASKGIAYELAKFVKPKLTVANRTMA-------RFESWNLNINQISLADAEKYLAEFDIVINTTPAGMAGNNESIINLKHLSPNTLMSDIVYIP-YKTPILEEAERKG-NHIYNGLDMFVYQGAESFKIWTNKDADINSMKTAVLQQLKGE |
| 1P77 Chain:A ((4-268)) | --YAVWGNPIAQSKSPLIQNKLAAQTHQTMEYIAKLGDLDAFEQQLLAFFEEGAKGCNITSPFKERAYQLADEYSQRAKLAEACNTLKKLDDGKLYADNTDGIGLVTDLQRLNWLRPNQHVLILGAGGATKGVLLPLLQ-AQQNIVLANRTFSKTKELAERFQPYG-NIQAVSMDSIP--LQTYDLVINATSA-------S-VDAEILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDGFGMLVAQAAHSFHLWRGVMPDFVS----VYEQLK-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1P77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -137147 for 2156 contacts (-63.6/contact) +
2D Compatibility (PS) -26070 + (NN) -4630 + (LL) 1292
1D Compatibility (HY) -14400 + (ID) 4300
Total energy: -185255.0 ( -85.93 by residue)
QMean score : 0.497
|
|
|